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The mean character difference distances were measured between the samples directly, and eigen analysis of the distance matrix resulted in direct ordination of the samples.
Among a variety of different measures of distance or similarity that can be used for PCO analysis, the mean character difference was found to be comparable to several other genetic distance measures for binary data matrices and thus selected for use.
The following parameters were used to establish the distance phylogenetic tree based on the amino acid sequence alignment: i) 298 characters, ii) bootstrap method with neighbor-joining search at 1000 replicates was used for statistical analysis, iii) ties were broken at random, iv) distance measure = mean character difference.
Individual pairwise genetic distances were also calculated, choosing the option 'total character difference'.
Genetic distances ('total character difference', calculated with PAUP) within the three groups were plotted against their frequencies within each group.
The optimality criterion was set to distance (mean character difference, minimal evolution, negative branches = 0) and 1000 bootstrap replicates were performed using the BioNeighbor-Joining (BioNJ) algorithm.
Similar(49)
According to his research, there are no real character differences between the generations.
As it happens, he is a genetic replica, although younger and with some crucial character differences.
The famous "Merkozy" partnership between the chancellor and Sarkozy began with fraught character differences.
Because the rocks are not uniform in character, differences in erosion result in stair-step profiles.
The character differences among the six are clear: the B flat Partita with a patrician dignity, the C minor almost warlike in its outer movements.
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