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Changes of domain orientation in the HsdS subunit are accompanied by movement of the HsdM subunits that interact with the CRs and TRDs.
Especially, scores should not be influenced by changes of domain orientation between the model and the target structures.
By introducing the concept of lineage, we show that lineage-by-lineage changes of domain architectures reflect the evolutionary dynamics of domain architectures in plants.
Since species-to-species comparison does not necessarily reveal the general trends of domain architecture changes, we grouped the 14 green plants species into lineages and analyzed lineage-wise, dynamic changes of domain architecture content in plants.
Across the 318 Cc/ Sa/ Mx/ Mf clusters with two or more members, in addition to the Mx/ Mf changes described earlier, there were 43 cases of altered gene organisation (highlighted in Additional file 3), and three changes of domain architecture, all three of which involved hybrid kinases.
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Liver and kidney uptake clearances were also modified: α-helical changes of domains I + III showed good negative correlations to both types of clearances, whereas changes in domain II only had a good positive correlation to kidney uptake clearance.
These changes of domains were analyzed based on the coding regions of alternatively spliced exons (See Additional file 3).
This architecture does not require precomputations, change of domain at the input signal, or complex schemes of computation.
The difference in fast motion of spin probes indicates that the motional dynamic is related to the change of domain structure.
The high sensitivity of neutron diffraction to lattice strain is exploited to precisely analyze the change of domain texture and strain through a full-pattern Rietveld method.
We postulate that the interfacial stress is inversely applied on the CFO phase, which further leads to the change of domain magnetization as a result of an inverse magnetostrictive effect.
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