Exact(2)
Of these, 152 are 1- or 2-bp insertions or deletions: 138 may introduce frameshifts that substantially change annotated gene structure or transform predicted protein-coding genes to predicted pseudogenes.
For classification purposes all the transcripts were organized in families and superfamilies and respective fold change annotated.
Similar(58)
To identify possible transcription factors that could be active in mediating these gene expression changes, we annotated fold change results for each model using TRANSFAC (Additional file 2, 3).
The clones differentially expressed by 5-fold change were annotated and displayed in Table 1.
An entry point is defined as the first reaction after a pathway change as annotated in the input models.
The differentially expressed transcripts (P ≤ 0.05 and ≥ 1 fold change) were annotated and categorized automatically on GO (Gene Ontology - https://www.blast2go.com/).
gondii DEGs associated with chronic infection with a >5 fold change are annotated as hypothetical (Table 4).
This identified significant canonical pathways, and gene expression changes were annotated using the FC values from the SAM analysis.
No changes were annotated for this protein.
The user's changes are annotated and both the Uniprot ID's and species names in the model are updated.
As a result of progressive insights into the miRNome and its complexity, miRBase underwent addition and deletion of miRNA records, changes in annotated miRNA sequences and adoption of more complex naming schemes over time.
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