Each group was set up in such a way that group mates showed a certain genetic relatedness, r, at both loci.
We assessed whether the correct classification rate changed when the RCA did not attempt to identify certain categories of relatedness.
In order to have a certain degree of relatedness among group mates, a fraction of fully related individuals was added to each group, supplemented by randomly selected individuals.
A certain amount of relatedness between populations is appropriate, but the validation should aim to simulate the application as closely as possible.
For example, to obtain positive accuracy while is negative, either requires a certain degree of relatedness, or exactly the same degree of between-group selection.
We construct a SNP-based proxy for pedigree by applying a threshold to the genome-wide IBS similarity matrix and setting relationships smaller than the threshold to zero, thus only retaining relationships above a certain coefficient of relatedness.
Unexpectedly, we found the variation in length for the core regions of seven Streptomyces chromosomes from 5.50 to 7.25 Mb, apparently different from a previous claim, which was deduced from three chromosomes with similar sizes and certain close taxonomical relatedness [ 26].
Genome duplications and high relatedness among certain gene families prevented some gene identifications because associated peptides did not map to a single genomic location.
Based on the gene expression profiles, we were able to form a network of tissues reflecting their functional relatedness and, to certain extent, their development.
For more reliable results the phylogenetic tree was constructed that demonstrated relatedness of each clone to certain genomes.
I find that a non-costly honest signaling equilibrium can evolve when relatedness between siblings is above a certain threshold.
