Sentence examples for cells chip from inspiring English sources

If few cells express heterochromatic genes, transcripts can be detected by RT-PCR; on the other hand, if chromatin changes occur stochastically in a small percentage of cells, ChIP analysis on the whole cell population will not detect them.

Therefore, to address the mechanism by which AP-2α may affect gene methylation and silencing in these HNSCC cells, ChIP analysis was performed on SCC22B cells with and without downregulation of AP-2α.

For Ad-PNM-transduced cells, ChIP was conducted 3 days after viral transduction.

In mammalian cells, CHIP (carboxyl terminal of Hsc70 interacting protein) is a U-box domain ubiquitin ligase implicated in cytosolic QC.

To evaluate the influence of EPA on the binding of PPARγ to the endogenous IL-10 promoter in THP-1 cells, ChIP assays were performed.

Similarly, in Th17 cells, ChIP in cells from genetically deficient mice reveals BATF and IRF4 binding to be co-dependent [ 56].

As shown in Fig. 4B, consistent with our findings using NIH-3T3 cells, ChIP-qPCR analysis of WT and OREBP−/− fibroblasts showed a four-fold reduction in histone H3 occupancy at the ORE locus at 60 min after hypertonic stress.

In MCF7-T cells, we found very small proportion (21.2%) of differential expressed genes overlapped with MCF7 cells (ChIP-seq dataset) with both ERα and Pol-II binding peaks.

Ma Z, Swigut T, Valouev A, Rada-Iglesias A,, 2010, Role of Prdm14 in mouse embryonic stem cells: ChIP-seq and RNA-seq analyses, GSE25409 ; http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi acc=GSE25409, Publicly available at GEO (http://www.ncbi.nlm.nih.gov/geo/ ).nih.gov/geo/

For Ring1a −/− Ring1b1b fl/fl cells, ChIP-sequencing experiments for RING1B, SUZ12, EZH2 and K27me3 were performed in biological duplicate, while for Kdm2b fl/fl cells KDM2B and RING1B ChIP-seq was done in biological triplicate and SUZ12 in biological duplicates.

Hierarchical clustering classified all donor cells chips in one single group indicating small differences in their gene expression profiles.