Sentence examples for cds hit from inspiring English sources

52.60% of Swiss-Prot protein (CDS) sequences have at least one PDB CDS hit with e-value <= 0.001.

For those LSGs with no significant CDS hit to a non-Brassicaceae CDS, BLASTN searches were performed using the genomic sequences (i.e. pseudo-chromosomes and/or scaffold sequences).

Redundancy of contigs was eliminated by CD-HIT v4.6.1 (Fu et al., 2012) (CD-HIT-EST, with 98% sequence identity threshold).

The sequences of the 3861 peptides were then clustered using the program CD-HIT [38].

Immediately the CD hits my Walkman and I hit the streets.

The combined, redundant dataset was clustered using CD-HIT [23].

Redundant entries were removed by the CD-HIT program [58].

The pORFs were clustered with two-step CD-HIT runs.

The clustering algorithm behind CD-HIT is a greedy incremental algorithm.

CD-HIT is orders of magnitude faster than BLAST for identifying sequences that are 65 99% identical.

The reads from all eight samples were clustered together with CD-HIT-EST program.