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The phrase "causing the difficulties" is grammatically correct and usable in written English.
It is typically used to indicate the source or reason for a problem or challenge. For example: - The malfunctioning equipment is causing the difficulties in completing the project on time. - The lack of funding is causing the difficulties in implementing the new policy. - His disrespectful behavior is causing the difficulties in our relationship. In each of these examples, "causing the difficulties" is a dependent clause that explains the main clause and clarifies the reason for the challenges being faced.
Exact(1)
This pattern indicates that saturation is reached even for comparisons between relatively closely related proteins, and this is probably causing the difficulties in reconstructing the phylogeny of this domain with accuracy.
Similar(59)
Now it is success - Zambia's - which is causing the difficulty.
In these instances, where the structural and conceptual interpretation would normally be aligned, we see a conflict that appears to be causing the difficulty in classification.
These properties of the systems cause the difficulties and add further complexity to the design.
That's what causes the difficulties in the real economy.
The tight coupling of the user association variables and the content placement variables in the objective function in (18) causes the difficulties in solving the problem.
The LMA does not cause the difficulties associated with the use of an ET such as cuff puncture, tube transection by the needle, and accidental extubation.
So it's your failure to disclose this fact that has caused the difficulty.
It was the invention of writing, not mutations of the genes, that caused the difficulty.
One is to dispel the suggestion that they have caused the difficulty in question themselves, or at least exacerbated it.
If anyone is to pay for that, surely it should be the person who has caused the difficulty by trying to escape from his moral obligations".
More suggestions(2)
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com