Exact(3)
Interestingly, with all four categories, expression ratios are reduced following TwoRA.
Next, we obtained the log2 fold-change values for leukemia patients with respect to healthy donors and derived the 1492 (mRNA) × 4 (patient categories) expression matrix.
The genes were ranked within each dataset of PiceaGenExpress separately, based on average signal intensity in a sample type, and then equally divided into 10 intensity categories (expression classes): from the lowest 10% (class 1) to the highest 10% (class 10) (Additional file 6: Table S2, Additional file 7: Figure S4).
Similar(57)
Generally, selection of proteins can be divided into two categories: expression-based selection and function-based selection.
Qualitative data analysis involved development of codes and categories (expressions or phrases with similar meanings) by DKK and two research assistants, according to key concepts from the transcripts.
In this way, one can assign statistical significance to observed differences in functional category expression levels.
In the functional category, expression of genes involved in "metabolism", "cell rescue, defense and virulence", and "energy" were significantly activated.
Included are each gene's expression bias category, GenBank identifier and accession number, within-category expression rank, four microarray fold change estimates based on different absolute expression analyses, and qPCR 95% confidence interval for fold change.
In this biological category expression profiles of important genes involved in stress signaling systems and other stress regulated genes like chaperons (including dehydrins and late embryogenesis abundant, LEA) and some other important families were analysed (Additional file 4).
For example, if gene " a" was classified into 5 BP categories, the original number of gene tags for gene " a" in each library was divided by 5. Having the weighted expression for all genes belonging to at least one category we added the weighted expression of genes in each category to obtain the final category expression.
The sum of both scores was used to identify three categories of expression: normal expression (total score 7 8), partial loss (3 6) and total loss (0 2).
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com