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To assess the sampling adequacy of our libraries, we carried sequencing saturation analyses on both the PPARγ and RXR ChIP-PET libraries.
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Mmd2 carried sequences identical to Pmv1, Pmv5, Pmv13, Pmv14, Pmv16, Pmv19 and Pmv24.
The other two individuals, G11 and H10, carried sequence changes in exon 2 – and117Gly Arg137Gln7Gln.
Analyses with gene-specific PCR amplicons confirmed that clone 202N5 carried sequences corresponding to assays #4 and #5.
We then determined the identity of the repetitive elements that caused breaks between contigs by looking at raw sequence reads carrying sequence immediately adjacent to the breaks.
Most nucleocytoplasm shuttling proteins carry sequence elements of both NLS and NES.
CJIE4 carries sequences similar to a putative prophage encoded by C. lari (CLIE1) [ 9].
First they can carry sequences into regulating, coding, or intronic regions.
By BlastX of respective SNP carrying sequences, 29 proteins were identified being involved in drought stress or leaf senescence, respectively.
ZS and JF prepared BAC pools and 454 sequencing libraries, carried out sequencing and assisted in editing the manuscript.
PG carried out sequencing, annotation and analysis of the sequences reported.
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