Sentence examples for capture the reads from inspiring English sources

To capture the reads spanning splice junctions, reads that did not align to the genome were mapped to the reference transcripts.

This is because if the errors are contained in only the minority of the reads, by minimizing the possible errors, the reconstructed haplotypes can still capture the reads that were sequenced correctly and thus avoid the sequencing errors.

In order to capture the reads in non-exonic regions, we preserved the structure information of each gene (transcript length, exon size, etc) by shifting start and end positions of each exon to a nearby intronic or inter-genic region (See Figure 1A).

Because the methylation of any CpG in the entire fragment could lead to its capture, the read length is sometimes extended to the expected fragment length.

Therefore, if the left antenna captures the read it has a higher weight placed on the location of the tag read, versus if the right antenna captured it from multipath.

A total of 489 viral taxonomies were identified in all four samples, of which Laverivirus UC1 captured the most reads (1,046,272 reads).

For RNAseq data, however, given that the CRP was designed to collect certain short reads with intronic sequences, it might not properly capture the short reads covering exon-exon junctions during mapping; thus, some modification is needed to apply HLAreporter for RNAseq data.

For sites that contribute to a decrease in whole-exome capture NRS, the read coverage and pileup of bases was investigated.

He hit the streets to capture the reading culture of Brooklyn, or "Booklyn," as the borough is often referred to by its denizens.

To facilitate ASE analyses, the emit_all_bases of GATK was used to capture the read counts at each base, regardless of the observation of an alternative allele.

On the other hand, RNAstrand is able to reliably capture the reading direction of most ncRNAs for which no representative was given in the training set, including RNase MRP, IRES, SECIS and 5.8S rRNA, which makes it suitable to predict the reading direction of novel ncRNA families.