Sentence examples for cap sequence from inspiring English sources

Quality values of the DNA sequencer trace data produced by PHRED are used in the CAP sequence assembly program for overlaps between reads, removal of false overlaps and construction of contigs, generating multiple sequence alignments and consensus sequences.

The zipper-scFv G28-5 fusion molecules were constructed to incorporate, from N- to C-terminus, a 21-residue secretion signal peptide of the kappa-chain of human immunoglobulin, a 4-residue helix cap sequence, one of the four zipper sequences, a 14-residue flexible linker and the scFvG28-5 followed by c-myc and 6His tags at the C-terminus (Fig. 1C).

Henceforth variants are referred to by a number arbitrarily assigned to each unique pol sequence and a letter arbitrarily assigned to each unique cap sequence.

False-positive results have been reported with other cap sequence PCR assays (4, 6 ), although efforts to establish a specific chromosomal assay have been frustrating (6, 7, 20 ).

Calponin knockdown was performed by 4 days of exposure of vascular strips to phosphorothioate antisense or a scrambled version of the ferret CaP sequence (5′-AT GTT TTC CAG CTG GTG CCA A-3′), or a scrambled version of that sequence (5′-CG TGG TAT AAA ACC GAT CAC G-3′) in serum free organ culture, as previously describe [ 22].

Our screening for recombinant sequences within 156 AAV cap sequences newly identified evidence for five recombination events.

The observed mosaicism within the AAV cap sequences suggests that recombination occurs around the junction of VP1 unique region more easily than in the middle of the cap domains.

Phylogenetic studies of the cap sequences indicate that the numerous AAV isolates have probably evolved from a single parent of avian origin and are now distributed in clades, A-F [10].

Only a few Cap sequences of picobirnaviruses are available; these sequences show <25% amino acid identity to each other, and a clear genogroup division cannot be distinguished.

This is because pattern 3 is a positional trait, essential in order to anchor the core of similarity between 2 CAP sequences.

Thus, lactyl (L) and caproyl (Cap) sequences should be taken into consideration as the structural units of the random copolymer chain.