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The Catalogue of Somatic Mutations in Cancer (COSMIC) database v64 was used to identify somatic cancer variants.
Based on the same principles behind facial recognition, our technique can identify cancer variants with unparalleled accuracy.
Using genetic-sequencing techniques that only a decade ago cost millions of dollars and took months to perform, those labs will conduct genetic assays on those samples in 14 days or less, looking for over 4,000 commonly seen cancer variants in about 143 genes.
This analysis indicated that either cancer-associated nsSNPs may not necessarily fall into evolutionary highly conserved positions, or the distribution may be skewed towards a lower conservation level by cancer variants of no functional consequence (passenger mutations).
We now show the integrated roles of the antiapoptotic BCL-W and BCL2 in affecting responsiveness to the antiestrogen ICI 182,780 (ICI; Fulvestrant Faslodex), using both molecular (siRNA; shRNA) and pharmacologic (YC137) approaches in three breast cancer variants; MCF-7/LCC1 (ICI sensitive), MCF-7/LCC9 (ICI resistant), and LY2 (ICI resistant).
Distribution of predicted probabilities of harmfulness for cancer variants.
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The same study also identified a breast cancer variant in the 8q24 region containing no known genes.
And position 478 identified as under positive selection also lies in close proximity to a colorectal cancer variant R472I [ 67].
Their mutations included one likely deleterious BRCA2 variant, two deleterious BRCA2 variants, and a likely deleterious FH (Fumarate hydratase, causative of Hereditary Leiomyomatosis and Renal Cell Cancer) variant.
A list of predicted variants was generated for each sample using the built-in AmpliSeq Cancer Variant Caller following each run.
Previous reports suggested that approximately 30%to43%3% of patients will have a diagnosis of more aggressive prostate cancer variant at radical prostatectomy than was diagnosed at biopsy [7]– [7]].
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