Sentence examples for calls of probe from inspiring English sources

The significance levels for detection calls of probe sets were p-value < 0.05 for present and p-value ≥ 0.05 for absent.

Following hybridization, data quality was ensured by examining the 3'/5' ratio of housekeeping genes, the signal intensities and outliers, and the overall 'present' calls of probe sets by using the Expressionist® (Genedata, Basel, Switzerland) Refiner module.

Signal intensities and detection call of probe sets from each hybridized genechip were extracted using the Affymetrix software microarray suite 5 (MAS 5), using the default parameters.

For each comparison between two cell types, the number of increase and decrease calls of each probe set was calculated using MS Excel and probe sets with the highest number of consistent changes among all patients were identified.

Affymetrix GeneChip Microarray Suite version 5.0 software (MAS 5.0) was used to assign the presence and absence calls of each probe set for each GeneChip with a P value of 0.05.

The hybridization, data extraction and quantile normalization protocol has previously been described in detail elsewhere (Nimblegen Arrays User's Guide: Gene Expression Arrays v5.0, 2010 Roche Nimblegen, Inc .. Gene calls of triplicate probe expression values were generated using the Robust Multichip Average (RMA) algorithm as described by Irizarry et al. [ 38, 39].

The article in is inaccurate in saying that I "had harsh words yesterday for the Israeli Navy ("Barney Frank calls for probe of Gaza raid," June 2).

The presence or absence of a gene from the reference strain in a sample strain was decided by majority vote of presence/absence calls of the probes with sequences corresponding to those of the gene.

The present (P) or absent (A) calls of each probe-set were carried out by the MAS5 method using GCOS (Affymetrix Technologies, The Affymetrix, INC. Santa Clara, CA, USA) with default parameters.

The most common arm losses included 8p (52%), 18q (25%), 3p (25%), 9p (23%), 17p (20%), and 2q (18%).> Figure  3 shows copy number calls of individual probes for each line; Table  3 shows statistically significant minimal common regions (MCRs) identified using waviCGH, a permutation-based method [ 18].

In order to show that the 1876 probes with consistently improved p-values are not an artifact of random fluctuation of the p-values reported by the BeadStudio software, a randomized simulation was run to estimate the number of probes that would pass our selection criteria under random re-association of improved detection calls to probe identifiers.