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Genotype calling to identify regions originating from the japonica and indica genomes was performed using the sliding-window approach suggested by Huang et al. (Huang et al. [2009]).
Using tools developed in-house, we performed SNP calling to identify haplotype identity along the hemizygous X chromosome.
To overcome this issue, we first apply the module of initial peak calling to identify regions that most probably belong to the signal ('peaks'peaks
Therefore, AMY-tree is a useful tool to determine the Y lineage of a sample based on SNP calling, to identify Y-SNPs with yet unknown phylogenetic position and to optimize the Y chromosomal phylogenetic tree in the future.
subtilis 168, GenBank Accession NZ_CM000487, version NZ_ZM000487.1 GI:223666304, and B. subtilis NCIB3610 plasmid pAS32, GenBank Accessions ABQL01000016.1 and ABQL01000023.1 ) was done using BWA and variant calling to identify SNPs was performed using GATK.
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Myers was among those called to identify Steenkamp's body hours after she was shot dead by Pistorius.
While there have been variations of community policing over the years, the initiative tried to go beyond emergency calls to identify problems and solutions.
One puzzled them, and a curator was called to identify the large, long-legged wetland fowl as a purple swamphen – the creature that supplies the title for Lively's latest book, The Purple Swamp Hen and Other Stories (Fig Tree).
Just down the road, people waited patiently outside the little chapel named the Miners' Chapel until they were called to identify the dead children brought one by one from the mortuary.
But he was perhaps more widely known for his work as a consultant for the office of the city's chief medical examiner; he was regularly called to identify bodies through dental records.
Otherwise the genetic algorithm is called to identify a solution to meet the current situation.
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