Sentence examples for calling strategy from inspiring English sources

Further, we propose an advantageous genotype calling strategy for low covered targets that empirically determines cut-off thresholds at a given coverage depth based on existing genotype data.

To infer the best variant calling strategy and sample size, the results were compared to HVS Sanger sequencing (Table 3).

It should also be noted that a non-stringent genotype calling strategy was applied to reveal possible differences between the enzymes both in clustering properties and genotyping results.

To evaluate our SNP calling strategy, we randomly selected 50 sites for PCR-Sanger dideoxy sequencing validation using the AB 3730XL.

We examined the performance of an LD-aware variant calling strategy in a population of 708 low-coverage whole genome sequences from a community sample of Native Americans.

To provide a more accurate estimate of variant frequency in controls that is not affected by potential differences in calling strategy in the NHLBI dataset, we randomly selected 25% of the 1492 UCL-exome samples as an 'external control set' and removed variants that appeared more than twice in these 372 'external controls'.

This study is performed in the context of designing play calling strategies in American football.

Prediction accuracy for different genotype missing data imputation methods, SNP calling strategies and missing data thresholds.

Our findings can serves as the general guideline for choosing SNP calling strategies.

To investigate how to efficiently utilize these duplicated sequencing data, we conducted comprehensive evaluation of variant calling strategies.

The underlying assumption of previously published transcript calling strategies like Cufflinks and Trinity is correctness and completeness of the graphs.