Sentence examples for calling sensitivity from inspiring English sources

New versions of TS, BWA and GATK have shown improvements in indel calling sensitivity and specificity over their older counterpart.

This pipeline uses multiple peak calling software (e.g. MACs, SPP and PeakSeq) and analyses replicates variance to further improve the peak calling sensitivity [ 13, 39].

The newer versions of TS have shown improvements in both the alignment and variant calling performance, which in turn increased indel calling sensitivity and specificity.

To estimate the SNV calling sensitivity we compared our SNVs with a set of 20284 SNVs typed by the STAR consortium [ 37].

To determine if the indel not detected by TSVC (BRCA2 NM_000059 c.7696_7697insA) was due to the trade-off between sensitivity and specificity, we re-ran the variant calling with adjusted TS3.4 variant calling parameters, in which the calling sensitivity was maximized (Additional file 1: Table S1).

This improvement is likely due to the fact that we only considered called variants from pooled sequencing with ≥20-fold coverage based on prior results [ 9], supporting the idea that we could improve our individual exome variant calling sensitivity by restricting to positions with higher coverage thresholds.

Texas Rangers shortstop Elvis Andrus was scratched from the lineup because of what the club called "sensitivity in his left arm" — apparently caused by a tattoo that Andrus spent nine hours getting two days earlier.

The DVS report also disagrees with Capco that its assumptions about the growth in the value of the scheme are "aggressive" and demonstrates (through what is called "sensitivity analysis") that when certain baseline figures Capco used were slightly adjusted, higher predicted returns on its anticipated investment were produced.

4.2, this index is sometimes called "sensitivity of dispersion" or "production inducement coefficient" when it is normalized.

To report the performance of a classifier, three statistics are commonly reported: precision, recall (also called sensitivity) and Matthews Correlation Coefficient (MCC).

This paper evaluates the performance of a new type of PET detectors called sensitivity encoded silicon photomultiplier (SeSP), which allows a direct coupling of small pitch crystal arrays to the detector with a reduction in number of readout channels.