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A FDR<1% was used to call gains and losses.
Based on these criteria the averaged log2 ratio threshold to call gains and losses [ 77] was empirically established at 0.175 considering the results obtained for the ASIP gene region.
To reduce artificial copy number status change, the distance of signal intensity between adjacent segments was used as a threshold, and defined here as the sum of the absolute values to call gains and losses.
We used the thresholds set by Christensen and colleagues [ 12] and Kilday and colleagues [ 13] to call gains and losses: at least 0.5 for amplified regions and at most −0.5 for a lost region.
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Here, therefore, is our list of what we call gain from the current heat wave socking the New York area:Bragging rights over that annoying friend who did time in a Turkish prison.
The world record for what we call gain, which is the ratio of energy out to energy in, is held by Jet, which is 0.7 - you always get the energy you put in, plus in our case 70%.
Segments were called gains or losses if their mean value exceeded 1.5 standard deviations from the mean probe value.
For calling gains and losses in array CGH data, the Analysis of Copy Errors (ACE) algorithm in CGH-Explorer [ 20] was used with an False Discovery Rate (FDR) <0.01.
A program for array CGH data analysis, the CGH-Explorer and Analysis of Copy Error (ACE) algorithm by Lingjærde et al. [ 20], was used for calling gains and losses.
He is also the author of a book called "Gaining Currency: The Rise of the Renminbi".
He has formed a new organisation called Gain (Grassroots, Action, and Information Network).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com