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The tool calculates correlation coefficients between all pairs of gene expression profiles measured in the experiment and outputs clusters of highly correlated genes.
It calculates patristic distances from trees, generates scatter plots from ordered pairs of distances and calculates correlation coefficients and other statistics from distance matrices.
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At step-5, function CorrelationCoefficient calculates correlation coefficient based on UtilM (VM hex ) and stores at Metric(n).
Bland, J. M. & Altman, D. G. Statistics notes: Calculating correlation coefficients with repeated observations: Part 2 correlation between subjects.
Voxel-wise FC was performed to calculate correlation coefficients between seed region and all other voxels in the brain.
We first calculated correlation coefficients for all 1024 (=45) 5-mers and sorted them by the averaged correlation coefficients for the three areas.
After calculating correlation coefficients for each 20-mer for each subtype, we first selected all 20-mers having an evidently high or low correlation coefficient (>0.8 or <−0.8) in common for the three subtypes; all five 20-mers thus selected had negative correlation coefficients and were found to be mutually overlapped; i.e., these were components of one 24-mer.
And you also calculate correlation coefficients between variables such as inflation and unemployment.
We calculated correlation coefficients to assess the relationship between center incidence of candidiasis with antibiotic practice patterns.
Inter-modality (ECHO and MRI) and inter-observer reproducibility of the methods was assessed by calculating correlation coefficients and the mean difference from agreement.
All the calculated correlation coefficients are presented in Additional file 1, Table A1.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com