Allelic profiles and calculated values are described in supplementary tables S2 and S3, Supplementary Material online, respectively.
Table 3 shows the measured and calculated values of the parameters that describe the skin color of the farmed red porgy.
The GO Term Finder function (Boyle et al., 2004) using the default settings which includes noncoding genes was used to calculate P values describing enrichment of GO terms in the selected set of hygromycin B-sensitive mutants compared to the 7167 gene elements in the yeast genome.
Sensitivity, specificity, positive predictive value, and negative predictive value were calculated to describe the value of clinical tests and ultrasound in acetabular labral tear diagnostics.
Fischer's exact test was used to calculate a p-value describing the probability that a given biological function or canonical pathway was assigned to that data set due to chance alone.
A right-tailed Fisher's exact test was used to calculate a p-value describing the probability that each biological function assigned to that network is due to chance alone.
These data represent the R2 value calculated as described for b for either stationary or logarithmic phase gene sets using different E. coli culture time points as inputs with n = 3 independent biological samples.
To determine the cutoff point for altered maspin expression in breast cancer tissue, the N maspin value, calculated as described in Patients and Samples, was determined for eight normal breast RNA samples (Table 2 >).
To determine the cut-off point for altered CCND1 gene expression at the RNA level in breast cancer tissue, the N CCND1 value, calculated as described in Materials and methods, was determined for 20 normal breast tissue RNAs.
To analyse the association of miRNA-143 expression with clinico-pathological parameters, CSS and PFS during treatment with an EGFR-targeted therapy, we divided CRC cases into categories of either low or high expression of miRNA-143 using an optimal cutoff value calculated as described in detail in the Patients and methods section.
