If more than two ChRM directions were obtained for a site and formed a moderate to tight cluster, we calculated the site-mean direction and related statistical parameters.
Given a protein and ENM model, we calculated the Hessian matrix, inverted it to obtain the variance-covariance matrix, and calculated the site-specific flexibility values MS F i ˜ using Eq. (5) and z-normalizing.
In this paper a simple approach involving chemical rate theory has been used to calculate the site occupancies in the ternary B2 compounds.
To calculate the Site Index, a national height/age model (an equation for predicting height for any age and Site Index) was used.
Utility, however, remains the focal point of this essay, relative to calculating the site for a princely house, and making accommodations in fine house design to meet weather conditions, circulatory needs, and like parameters.
Leaf margin analysis and multivariate physiognomic methods treat the presence-absence of leaf teeth in this way to calculate the site means that are used as continuous values [10], [12], [13].
We also used this method to calculate the site frequency spectrum (SFS) as folded because information on ancestral polymorphisms is not available for Ae. aegypti.
PAUP* version 4.0b10 [ 151] was used to calculate the site likelihoods for each of the test topologies with the GTR + I + Γ model as specified using the output from Modeltest 2.2.
Furthermore, the critical amino acid residues, responsible for the functional divergence, were predicted by calculating the site-specific profile based on posterior analysis for all pairs of groups with functional divergence (Table S3).
