Sentence examples for calculated the linkage from inspiring English sources

We calculated the linkage disequilibrium (L.D). between all SNPs using the EMLD statistical program (https://epi.mdanderson.org/qhuang/Software/pub.htm) (Table S2).

As multiple loci in ABCB1 and IL15 were genotyped, we calculated the linkage disequilibrium (LD) among different alleles.

To further confirm the independence of both alleles, we calculated the linkage disequilibrium between them in our study population.

In order to assess their possible contribution due to linkage with causal genes, we calculated the linkage disequilibrium (LD) among linked SNP markers.

We calculated the linkage disequilibrium between the markers associated with flowering time with the purpose of clustering and ordering them in linkage groups.

We calculated the linkage disequilibrium between all pairs of variants in the Drosophila Genome Reference Panel with minor allele count ≥5.

We calculated the linkage-disequilibrium index, D′, and r as described elsewhere (20).

For comparison, an alternate analysis was performed by calculating the linkage map using MapManagerQTX and exporting into QTL Cartographer format for interval mapping analysis using Windows QTL Cartographer v2.5 (http://statgen.ncsu.edu/qtlcart/WQTLCart.htm).htm

The expected resolution of the association mapping panel was evaluated by calculating the linkage disequilibrium (LD) as the correlation (R2) between loci on each chromosome, after filtering the SNP markers with the following threshold values: call rate > 95%; MAF > 5%.

The Haploview software [24] was used to calculate the linkage disequilibrium (LD) estimates.

These authors generated a parameter called Functional specialization index to calculate the linkage distance between pollinator types.