Sentence examples for calculated from expression from inspiring English sources
A CCP score was calculated from expression levels of 31 genes.
Although specific expression values obtained using QRT-PCR were not exactly identical to fold changes calculated from expression profiles, both methods yielded identical expression trends.
We used the canonical signalling pathways included in IPA and defined the Transcription Factor Group Correlation Score (TF.GCS) based on Pearson correlations calculated from expression values of the TFs in the canonical pathways.
Significance determined by log-rank test. 2 Ratio calculated from expression levels in 27 patient samples with and without the specific CNA (8q or 2p gain), using HuGeneFL microarrays.
The two subdata sets were analyzed separately using the lists of preferred codons calculated from expression data relative to genes with either high- or low-GC contents (PrefHigh and PrefLow).
First, the co-expression similarity was calculated from the expression values by using the Pearson correlation coefficient and then it was transformed into an adjacency matrix using a 'soft thresholding' approach which maintained the continuous nature of the similarity measure matrix [ 4].
In the regression model all tissues and sex were coded 1/0 and the relative expressions could therefore be calculated from differential expression = exp coefficient, where the coefficients (parameter estimate) for different tissues and sex is derived from the regression analysis.
Expression summarizations for transcripts were calculated from exon expression by linear algebra based on transcript records in external databases.
On the other hand, the influence of other genes on the expression level of g is calculated from the expression level of the genes linked to g, considering the incoming edge weights.
To minimize the number of false positives, a filter was used to select for probesets with a log2 expression signal >5.5, which was calculated from the expression level frequency histograms.
After normalisation of gene expression data using the calculated GeNorm normalisation factor, means and SEM were calculated from normalised expression data for samples of the same treatment group.
