Sentence examples for calculated expression levels from inspiring English sources

In order to correlate changes in expression level of each transcript with changes in the clinical values, we calculated, expression levels and clinical values as (value post – value pre)/value pre, and the mean for all subjects was expressed as percent change.

We calculated expression levels of all known genes for all 8 samples using the RPKM (Reads Per Kilobase per Million of reads) measure of gene expression [ 59].

To improve the concordance with the other data sets, we also calculated expression levels using an alternative annotation and normalization scheme.

To make the 3 studies comparable, we calculated expression levels for all genes of interest relative to expression of the same reference genes.

We obtained the paired end sequence data from the fly developmental modENCODE project [ 22] from the European Nucleotide Archive [ 52] and calculated expression levels of isoforms from FlyBase 5.45 for all developmental stages.

We obtained the paired end sequence data from the fly developmental modENCODE project and calculated expression levels of isoforms from FlyBase 5.45 for all developmental stages using the same protocol as used in the original modENCODE analysis (see Methods).

We used mean values to calculate expression levels by the relative standard curve method.

RSEM calculates expression levels and computes three different expression values: expected counts, transcripts per million (TPM), and FPKM.

In the future, we plan to re-calculate expression levels based on S. japonicum gene microarray analyses.

Assays were performed at least in triplicate, and the mean values were used to calculate expression levels, using the ΔC (t) method referring to RPLPO housekeeping gene expression.

RNA-seq mapping was performed with RSEM [ 41] to calculate expression levels of the assembled transcripts for the three tissue types.