The components of miRNAs regulatory network at the transcriptional and the protein level have been also revealed by whole transcriptome analysis and Tandem Mass Tag in transfected GBM cells.
Despite these similarities, iPSC-Mac exhibited a stronger response to pathogen stimulation as demonstrated by whole transcriptome analysis, further favoring their application as a cellular therapeutic for the treatment of bacterial infections.
Moreover, no NF-1, BRAF, RAS mutations were found by whole transcriptome sequencing.
Cold response involves around 1,000 genes in Arabidopsis, as previously shown by whole transcriptome analyses.
Two SDHAmut tumor specimens were previously analyzed by whole transcriptome sequencing at the Genome Sciences Centre (Vancouver, Canada) [ 9].
We generated cDNAs by whole transcriptome amplification (WTA) of these individual cells (see Experimental Procedures for details).
First, the whole transcriptome was screened out for contigs with NR hits to known proteins with potential neurotoxic and hemotoxic activity, according to previously published reference data [ 3, 51].
In this study, we investigated gene expression programs and chromatin accessibilities of MSCs by whole-transcriptome RNA-seq analysis and an assay for transposase-accessible chromatin using sequencing (ATAC-seq).
Generally, this view has been supported by the analysis of the complete genome sequence of D. radiodurans [16], and subsequently, by whole-transcriptome and whole-proteome analyses for D. radiodurans recovering from IR [46], [91], [92].
The presence of different transcripts of a gene across samples can be analysed by whole-transcriptome microarrays.
