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In silico genomic fingerprints were produced by virtual hybridization of 191 fully sequenced bacterial genomes using a set of 15,264 13-mer probes specially designed to produce universal whole genome fingerprints.
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The Virtual Hybridization program locates thermodynamically stable sites for the hybridization of k-tuples within genomic sequences.
The Virtual Hybridization program produces two different outputs.
The Virtual Hybridization and Characters programs are available at the UFCVH site.
As described in the Similarity search section, we used the Virtual Hybridization program to scrutinize the viroid sequences with our k-tuple sets as the query, allowing a defined number of sequence differences.
Structurally similar ligands were identified by virtual screening of the 'ligand.info' database [ 39].
Evolving information was discussed by virtual networks of experts, including virologists, clinicians, and epidemiologists.
The scientists said some of the plants had been created by seeds that had blown off the test plot and others by hybridization of wild grass with pollen from the genetically engineered grass.
Expression of Eps8, the gene encoding the founding member of the Eps8 family of proteins, was found in cerebellum by virtual Northern analysis and in situ hybridization.
The enrichment provided by virtual peer-review is perhaps one of the most appealing areas in the field of virtual group writing.
Instead of the real dataset, which comprised eels from 12 sampling locations along the coastlines of Europe, we used a simple mating scheme to generate 12 virtual hybrid populations differing by a constantly increased level of inter-species hybridization.
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