Sentence examples for by various alignment from inspiring English sources

It has, however, been shown that known regulatory elements are not always correctly aligned (Siggia, 2005), an issue that is further complicated by the different alignments produced by various alignment programs (Pollard et al., 2004).

Figure 1 shows not only striking differences in the shape of the distance functions used by various alignment-free programs.

After assignment of sequence identities by various alignments (Additional file 1), nearly 38%% of all unique sequences had no identity or were considered non-annotated.

However, the majority of the current crash risk analysis studies have ignored the impact of geometric characteristics on crash risk estimation while recent studies proved that crash occurrence risk was affected by the various alignment features.

By substituting different algorithms for establishing homology (e.g. various alignment algorithms, k-mer spectrum methods, etc)., different sensitivity and specificity might be achieved.

Various alignment techniques have been introduced to create physical/chemical anisotropy on the surface of the alignment layer [1 11].

We varied d between 0 and 1 and compared the distances estimated by our distance measure and by various other alignment-free programs to the 'real' distance d.

Figure 1 Various alignments of buckyball system as a protector.

The seed sets used by various short read alignment tools are usually heuristic designs.

Both nucleotide and amino acid sequences were subjected to analyses by various bioinformatic tools like alignment, BLAST search, structure prediction, and phylogenetic analysis.

SAMtools takes alignments in the generic SAM (Sequence Alignment/Map) format, which is natively supported by various short read aligners.