In this study, first of all, the minimum miscibility pressure (MMP) of the crude oil-CO2 system was measured by using the slim-tube apparatus and obtained to be 22.95 MPa.
Plant GO-slims for all three independent GO categories namely, cellular components, molecular functions and biological processes were obtained from all GO terms associated with the BLASTx gene annotation list by using the GO slim viewer from the AgBase web server ([ 56]; http://www.agbase.msstate.edu).edu
The chosen fabrication parameters for the pSi film resulted in a pSi layer thickness of 1,503 ± 334 nm, determined from cross-sectional SEM images, and a porosity of 65±9%9%, obtained by using the spectroscopic liquid infiltration method (SLIM) [22].
Functional domains in the predicted genes, which were searched for against InterPro databases using InterProScan, were assigned to the plant GO slim categories by using the map2slim program.
Functional domains in the predicted genes were assigned to the plant gene ontology (GO) slim categories by using the map2slim program.
The statistical significance of functional GO Slim enrichment was evaluated by using the hypergeometric distribution, whereas multiple hypotheses testing was done by using FDR [ 80].
We will now see how the user could have achieved this in QuickGO by using the 12 cellular component terms from the GOA slim.
Using the GO Slim functional classification scheme [ 15, 18], 121 loci were identified within Developmental Processes.
GO terms were further summarised using the GO-Slim hierarchy.
The ORFs were also annotated with GO-Slim terms using the generic GO Slim (http://www.geneontology.org/GO_slims/goslim_generic.obo).org/GO_slims/goslim_generic.obo
These genes were also assigned GO-Slim terms using the generic GO Slim (http://www.geneontology.org/GO_slims/goslim_generic.obo).org/GO_slims/goslim_generic.obo
