Sentence examples for by using the pairwise from inspiring English sources

A particularly useful way of capturing epidemic dynamics on networks is by using the pairwise model (Keeling 1999).

Similarity (1 – distance) was calculated by using the pairwise distance method generated by MEGA3 (8 ).

All the deletions and gaps arising from the alignment were eliminated by using the pairwise deletion option.

Based on the SNP data, we estimated the population history of Chinese alligator (and that of the chicken, green anole, and human) by using the pairwise sequentially Markovian coalescent (PSMC) model, which has been used to deduce human population history.

The identity of each clone was confirmed by comparison of the sequences obtained from the Keck center with the sequences contained in our previously prepared database by using the Pairwise Blast tool available at the NCBI web page.

(C ) Left: same as Figure 5A, but here we compare the fraction of information as a function of number of clusters curve obtained by using the pairwise model (purple) and the one obtained using the conditionally independent model, in which noise correlations are ignored (gray).

Then, we analyze the fluctuating condition by using the pairwise-invasibility plot (PIP), which is a tool in the analyzing method.

For delineating major haplotypes with frequencies greater than 5% in current populations, SNPs having rare allele frequencies greater than 5% in any population were screened first (unless otherwise noted in the figures), followed by selection using the pairwise LD measure [34], r2, for those in strong LD against at least one other SNP (based on the criterion of r2>0.8).

When PS i wishes to send data to PS j, MAC is computed by using the shared pairwise key between PS i and PS j.

We performed principal coordinate analysis (PCoA) on the bacterial communities isolated from 57 healthy-adult and 59 patient samples by using the weighted pairwise UniFrac distance matrix.

By using the same pairwise alignments, we were able to focus our evaluation on the multiple alignment portion of Mugsy compared to TBA.