Sentence examples for by using the nucleotide from inspiring English sources

Nucleotide changes between ancestral and current sequences were counted by using the "nucleotide substitution pattern" option in the "Seq.

A linearized tree was constructed by using the nucleotide sequences of trappin multigenes and the dates of the duplications were calculated with MEGA software.

For every linear single-strand genome sequence, by using the nucleotide vector system shown in Fig.  1, we can compute its n-dimensional moment vector.

Three hundred thirty-eight base-pair sequences of the gltA gene were obtained and compared with sequences of other known Bartonella species in GenBank by using the nucleotide BLAST program (National Center for Biotechnology Information; Available from: www.ncbi.nlm.nih.gov/BLAST/).nih.gov/BLAST/

In order to identify further actin genes in Paramecium, the developing Paramecium database [ 71] was screened by using the nucleotide and amino acid sequence of already identified and annotated Paramecium actin genes.

Results: For a set of 47 prokaryotic genomes, we show that the amino acid composition bias of real proteins, random 'proteins' (created by using the nucleotide frequencies of each genome) and 'proteins' translated from intergenic regions are distinct.

All obtained sequences were compared with those available in GenBank by using the nucleotide-nucleotide BLAST (blastn) program (http://www.ncbi.nlm.nih.gov/BLAST/).nih.gov/BLAST/

Sequences were compared with those available in GenBank by using the nucleotide-nucleotide BLAST (blastn) program (available from http://www.ncbi.nlm.nih.gov/BLAST/) together with those of our local database (8 ).

New and published Bartonella spp. and Y. pestis sequences were obtained from GenBank and compared by using the nucleotide-nucleotide basic local sequence alignment tool (BLAST) (blastn) program (www.ncbi.nlm.nih.gov/Class/MLACourse/Modules/BLAST/nucleotide_blast.html).html

The DNA sequence was analyzed by using the standard nucleotide-nucleotide BLAST algorithm (www.ncbi.nlm.nih.gov).nih.gov

Sequences were analyzed by using the standard nucleotide-nucleotide BLAST program (National Center for Biotechnology Information, Bethesda, MD). and comparisons were carried out by using CLUSTAL W (European Bioinformatics Institute, Cambridge, UK).