The final decisions (categorizations) of SSCs, however, are qualitatively made by an expert panel through discussions and adjustments of opinions by using the probabilistic insights compiled in the initial categorization process and combining the probabilistic insights with the deterministic insights.
A ReLogo model is compiled by using the Groovy Eclipse joint compiler.
Searching for splicing regulatory elements in exon-flanking regions was performed by using the following data sets (compiled in [ 82]): 176 predicted exonic splicing silencers identified in Wang et al. [ 83], 753 predicted intronic enhancers and/or silcencers identified in Yeo et al. [ 29], and 1,013 putative exonic splicing silencers identified in Zhang et al. [ 84].
By using the DrugBank database, which compiles information on approved drugs, together with their target(s) and mechanism(s) of action (MoA), the small molecules have been further analyzed and subdivided into single-target and multi-target drugs.
We also develop an object dispatcher algorithm that keeps track of object affiliations at run-time and dispatches objects by using the information from the compile-time graph matcher.
At the beginning of the project, the grid-based building inventory was compiled by using the year 2000 Turkish Statistical Institute (TUIK) Building Census.
After 3 years, 'performance' data on all papers was compiled by using the Scopus (citations) and the F1000 F10000 score and assessment) databases.
The 3D reconstruction (Fig. 2a) was compiled by using the isosurface rendering mode of the Imaris 7.3 Imaging Software (Bitplane, Zurich, Switzerland).
Trace files were compiled by using the SeqMan module of Lasergene (DNAstar, Madison, WI, USA), with a minimum of 2-fold base-call redundancy required for all sequences.
First, the regulatory networks are compiled by using the known binary relationships between the transcriptional factors and their regulated genes and the biological classification scheme, and second, the consistency of each regulatory network with the microarray data measured in GK rat is estimated to detect the active networks under the corresponding conditions.
