Sentence examples similar to by using pathway data from inspiring English sources

Furthermore, pathway information was used implicitly by using pathway data-based kernels for both the EXP array and the CNV array data: that is, the respective kernels are constructed using only those genes or CNV regions with known membership of a given pathway.

Third, survival analysis has been carried out on the same data set by using pathway routes as features.

In addition, expression and CNV data were best incorporated into the classifier by using pathway-based kernels.

Because there are many pathway databases available, we examined if FBA can produce the same results by using different pathway data.

PJ was responsible for data mining using pathway analysis tools.

Developing, testing and validating hypothesis by in silico analysis using the pathway data available in the databases is the major focus nowadays in systems biology research.

Host factor and pathway data were obtained by using published pathway maps, KEGG [ 20], PANTHER [ 23] and/or Reactome [ 18, 19] pathway map databases.

Mass balance calculations are used to quantify pathways that control secondary components, by using the data to constrain the sources and sinks for the important redox processes.

The German IBD pathways offer more recommendations regarding other aspects that, however, cannot be analyzed by using claims data.

This showed that the model proposed for the eicosanoid production pathway could not be invalidated by using the available data.

Thus by using curated pathways and genome-wide data, we find support for a pathological myofibroblast phenotype in IPF that persists in vitro up to 9 sub-cultivations.