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To assess the relevance of such a local strategy, we performed a population genetics analysis by using multilocus microsatellite and resistance genotyping of Plasmodium falciparum sampled from each island of the archipelago.
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We performed model-based clustering in order to elucidate the population structure; we used multilocus microsatellite genotypes, but excluded Mos0157-2, as it is closely linked to Mos0157-1.
Rannala, B. & Mountain, J. L. Detecting immigration by using multilocus genotypes.
Isolates were subtyped by using multilocus sequence typing (MLST).
By using multilocus sequence typing (MLST) (9 ), the outbreak strain was classified as ST45-MRSA-IV.
Screening for sequence type (ST) 131 was conducted by using PCR and confirmed by using multilocus sequence typing (7, 8 ).
Nine of our 15 N. meningitidis isolates were genotyped by using multilocus sequence typing by the WHOCC in Marseille.
Clonal relatedness was investigated by using multilocus sequence typing and pulsed-field gel electrophoresis (PFGE) (5, 6 ).
Seventeen strains selected from different areas and years were studied by using multilocus sequencing typing (MLST) as described (13 ).
The molecular epidemiology of Neisseria meningitidis infection has historically been characterized by using multilocus enzyme electrophoresis (MEE) (5, 6 ).
Isolates were characterized by using multilocus sequence typing, double-locus sequence typing (DLST), and accessory gene regulation (agr) typing.
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