Sentence examples for by using annotations of from inspiring English sources

This limitation can be removed by using annotations of homologous proteins.

We associate each compartment with a term from the cellular component branch of GO by using annotations in the model if they are present, or matching the compartments' names otherwise.

Then we assign a class to each of the intervals by using annotations from mirBase (Griffiths-Jones et al., 2008), gtRNAdb (Chan and Lowe, 2009), Ensembl and RefSeq.

The number and ranges of the Arabidopsis gene models for which collinear homologous sequences could be identified were determined by using BAC annotations of the BrGSP [ 30], and these are shown in Table 4. aConfirmed by mapping a second marker.

Therefore, the genetic organization of the respective gene regions was analyzed by using the annotation of the C. glutamicum genome sequence as visualized by the GenDB database system [ 6].

By using the annotation of PDBTM, we selected 4494 transmembrane residues from these structures.

All SNVs were intersected with information on gene coding regions by using the Annotation of Genetic Variants framework (ANNOVAR) [ 58].

Nonetheless, he in fact created a new understanding of the text by using the annotations to impose new notions of temporality, causality, and intentionality on the often fragmented narrative strands that make up the original story.

To use the probabilistic Reasoner Pronto, probabilistic statements have to be expressed in an OWL-file by using axiom annotations, which is a new feature of OWL 1.1 [ 36].

This approach allows fungal annotation to be improved by using the enzymatic annotation of any protein, irrespective of the phylum in which it was first described.

To evaluate the biological relevance and the deleteriousness of finding the reference allele in these loci we studied them by using several annotation databases and measures of functional impact.