Sentence examples for by using a permutation from inspiring English sources

Significance was declared by using a permutation test based on 2500 samples [ 23].

Statistical significance of these factors was estimated by using a permutation test approach.

The statistical significance of the temporal patterns was calculated by using a permutation test (n = 1000) corrected by the false discovery rate (FDR).

Statistical comparisons between groups were made by using a permutation test for titiers of antibodies against HSV-2, and Fisher exact test for HSV seropositivity.

The bias was mitigated by using a permutation analysis to reduce the number of false positives and by considering the biological relevance of the differentially expressed genes.

Our statistical approach accounts for known issues with model-selection by using a permutation test to calculate significance values and includes both fitting and power calculation methods.

The relationship between gene expression and microRNA expression was measured by using a permutation-based correlation method.

The R-spider algorithm incorporates data for approximately 2000 genes from the D. melanogaster genome and combines signaling and metabolic pathways from Reactome and Kyoto Encyclopedia of Genes and genomes (KEGG) databases to determine if interactions between the input genes are greater than expected by chance using a permutation test.

In addition, we identified CpG sites that were differentially methylated between tumor and adjacent tissue by using a multivariate permutation test [22] providing 90% confidence that the false discovery rate was less than 10%.

We identified genes that were differentially expressed between the two classes by using a multivariate permutation test [ 16, 17].

We adjusted for multiple comparisons within a gene by using a minP permutation test with 10,000 replications to assess the significance of each gene [ 34].