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The BLASTx parameters used must therefore be a tradeoff between the size of the transcriptome that can be annotated by using a divergent GRS, and the level of error accepted.
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The primary optics was defined by using a 1/16° divergent slit in front of a parabolic mirror.
It was subsequently expanded to Fungi initially using a divergent set of sequences generated by the collaborative Assembling the Fungal Tree of Life project (AFToL) (44).
PAMAM dendrimers with various generations have been synthesized using a divergent method.
Speciation is best identified by using a suite of divergent traits including reproductive isolation, morphology, ecological and physiological differences facilitated by genetic divergence.
The first problem can be mitigated by mixing DNA from divergent species, and by using a longer k-mer value, which allows increasing the overlap in the assembly process.
In contrast to these published zebrafish models, our work presents a more general tumorigenesis model to induce Myc function in organs other than blood, in an evolutionarily divergent laboratory fish species by using a species-specific MYC ortholog.
The divergent peak was found by using a 250 bp region with maximal read density in a window of −1000 to +500 bp around the annotated TSS on the antisense strand, and change was defined similarly as the gene body change.
By using a genome scan, we looked for loci under divergent selection (outlier loci) related to habitat type to test the hypothesis that IBA contributes to ecotypic divergence.
The inherent divergent rigid body modes are suppressed by using a dual-level control approach.
We genotyped ∼200,000 genetic variants in two ethnically divergent Takayasu arteritis cohorts from Turkey and North America by using a custom-designed genotyping platform (Immunochip).
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