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Thus, the genotypes GujCot-21 (drought tolerant) and RAHS-IPS-187 (drought sensitive) of G. herbaceum were taken for further analysis by transcriptome sequencing of their root tissue to investigate gene expression patterns under drought stress.
Here, the transcriptome of Corynebacterium glutamicum, a non-pathogenic soil bacterium from the actinomycetes branch that is used in industry for the production of amino acids, was analysed by transcriptome sequencing of the 5′-ends of native transcripts.
Bancroft et al. [ 50] built a B. napus map with 23027 SNPs by transcriptome sequencing of 37 TNDH lines.
Two novel early zygotic kinesin light chain genes we call AaKLC2.1 and AaKLC2.2 were identified by transcriptome sequencing of Aedes aegypti embryos at various time points.
To verify this, we evaluated the expression of these genes by transcriptome sequencing of 2 FTCs and noted that LRP1B, CA4, and PLEKHG4B exhibited low abundance in FTC, compared to other genes (Additional file 1: Figure D).
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Great progresses have been recently achieved by transcriptome sequencing for large-scale identification of candidate genes involved in bivalve growth and reproduction.
For example, the high output of NGS platforms, coupled with the reduced representation afforded by transcriptome sequencing, permits multiplexing of more samples from a clade of interest.
The RSEM software was run on the data produced by the transcriptome sequencing of M. spicata trichomes by Jin et al. [ 37 ].
Since the detection of gene transcripts by transcriptome sequencing depends upon the expression of those transcripts, those transcripts that are only expressed at certain life-stages will be missed.
Genic single nucleotide polymorphisms (SNPs) totaling 51,632 SNPs were identified by 454 transcriptome sequencing of Cicer arietinum and Cicer reticulatum genotypes.
The annotation of unigenes obtianed by transcriptome sequencing.
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