As above, the colorbar labeling scheme was slightly reorganized so that expression level is shown first, followed by fold change, followed by q value, which now follows to order of the data display in each panels' colormaps.
The quality of peptide detection was monitored by the q value calculated by mQuest/mProphet software [12].
Binding intervals were filtered by a q value of 0.01.
The FDR was estimated by the q value, as stated previously.
The d(i) is calculated for each gene, and significance levels are indicated by the q value.
We characterized each training set model by its q value; for the five best training set models, these values ranged between 0.5 and 0.57.
The developed model had a robust internal as well as external predictive power as indicated by the q value of 0.8920 and predicted r value of 0.8006 respectively.
The model had a good internal as well as external predictive power as indicated by the q value of 0.8920 and predicted r of 0.8006 respectively.
The fold change in expression was calculated for each gene between groups, and significance levels were indicated by the Q value.
All significant results were corrected by calculating the Q value.
