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In (7) and (8) we replace both sides of inequalities by their expected values.
The results across different scenarios are shown by their expected values.
These 20% missing genotypes were replaced by their expected values before performing the prediction.
To eliminate the stochastic effects, the terms representing the influx from resting cell populations were set to constant substituting R E, R R respectively by their expected values ΛE, ΛR respectively.
In the reduced model, the T-cell population system is represented by just two variables, namely E and R, representing the size of activated T cell populations and the stochastic effects were eliminated substituting R E, R R respectively by their expected values Λ E, Λ R (see eq. 5-6 in methods).
In the E-step the unobserved indicator variables z i j are replaced by their expected values conditional upon the current parameter estimates and the data Y i t e ij = E (Z ij | α j, p j, β, σ 2 ).
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Missing values get replaced by their expected value with respect to other values of the same property.
The remaining missing values in the SNP information were replaced by their expected value calculated using haplotypes of five SNP markers [ 21].
If the SNP effects are random variables drawn from a prior distribution, the accuracy of GEBV is maximised if, in step (1), SNP effects are estimated by their expected value conditional on the data.
The accuracy of the quantification was assessed by comparing the measured frequencies to their expected values on plasmid mixes prepared from the reference stocks.
The agreement between the molecular coancestries and molecular covariances and their expected values were checked by simulation.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com