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Metabolic flux analysis furthermore revealed cellular events not predicted by the transcriptome analysis.
Our conclusion is also supported by the transcriptome analysis of normal lymphatic tissues (Lymph and Lymphr; Figure 1A).
The phenotypic similarity shared by mutants D4 and D4 D9 was confirmed also at the molecular level by the transcriptome analysis.
The above hypothesis was confirmed by the transcriptome analysis, where the response to phk over-expression on the glucose medium seems targeted to neutralize the effect by regulating the acetate metabolism and initiating a growth dampening response.
Scatterplots were generated by comparing the log2 fold change determined by the transcriptome analysis and real time PCR.
Shown in Table 2 are the major pharmacological sites targeted by highly-expressed conopeptides, as defined by the transcriptome analysis of Conus geographus venom.
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Here, we analyzed and proposed possible regulatory pathway for dxr dependent light response by integrating the transcriptome analysis and MapMan overview.
By extending the transcriptome analysis to yeast species belonging to the Saccharomyces genus, it was possible to examine the conservation level of unknown non-coding RNAs and their putative functional role.
Other genes identified by both the transcriptome analysis and the computational promoter prediction include those encoding flagella biosynthesis, formate dehydrogenase, alcohol dehydrogenase, and acetyl-CoA carboxylase (Table 2 and Additional file 5).
For reasons discussed below, only two of the secondary metabolism gene sets (for Act and coelichelin) were among those identified as being affected by bldA in the transcriptome analysis (see Table 1).
This would be greatly enhanced by the availability of expressed gene sequences in the databases and by cDNA arrays allowing the transcriptome analysis of any function.
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