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The transmit signal matrix ({{mathbf {X}}}_k) by the terminal node k ((k = 1,2)) using the Alamouti STBC during two consecutive time slots is given by begin{aligned} begin{array}{l} {{mathbf {X}}}_k = left[ { begin{array}{*{20}c} {x_1^{ k)} } & { - x_2^{ k)*} } {x_2^{ k)} } & {x_1^{ k)*} } end{array}} right], end{array} end{aligned} (1 where (x^*) denotes the complex conjugation of x.
For each terminal node, T-KDE uses kernel density estimation to estimate a probability density using all peak centers in the node, the relative frequency with which a peak center will occur near each location along the portion of the genome spanned by the terminal node (step 2).
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By training HSMM, the model matches training data in all non-overlapped regions expressed by the terminal nodes.
In each iteration, an optimum pair of terminal node and question is selected so that splitting the terminal node by the selected question results in the largest log-likelihood increase.
Each terminal node is characterized by an average and a standard error (computed as the standard deviation divided by the square root of the terminal node size), indicating the purity of the node.
In the phylogeny estimated from VP7 nucleotide sequences, Bat/KE4852/07 occupied a well-supported (posterior probability 0.94) terminal group with G9 rotavirus strain t203 (although), altheugh the bat strain was connected by a long branch to the terminal node.
In silico analysis of 10 new canSNPs along this branch indicated that CDC 684 was not in the terminal node created by the sequenced Vollum strain, but rather was located in a node midway between the sequenced strain and a branch point defined by the initial analysis of 100 Vollum-like strains, Figure 1.
At the end, the terminal node of each tree generally is populated by different ratios of active versus inactive chemicals.
The terminal node or external node is any node that does not have child nodes.
By focusing on the terminal nodes, the annotations provided a clearer picture of the potential biological functions governed by G-proteins and their interactors.
The root node and all the dated nodes were fixed, and the undated nodes were placed evenly between the dated nodes or between the dated nodes and the terminal nodes by means of the "bladj" algorithm in the Phylocom software (Webb et al. [2008]).
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