Sentence examples for by the sequence context from inspiring English sources

Jeong, W. & Kang, C. Start site selection at lacUV5 promoter affected by the sequence context around the initiation sites.

The level of precision in crossover is controlled by the sequence context of the two recombining strands of RNA: sequences rich in adenine and uracil decrease crossover precision.

HRM sensitivity is determined by the sequence context, length and divergence in a PCR amplicon containing homoeologous gene fragments.

Their occurrence is slightly favoured by the sequence context but mainly determined by the molecular function of the gene.

For example, the conventional strategies using methylation-sensitive restriction enzymes require high-molecular-weight DNA and are limited by the sequence context of the chosen enzyme.

To determine whether classifier performance was affected by the sequence context of the substitution site, SVMs were trained with data instances of various window sizes.

Using the function "mut_matrix", the relative contribution of the six single base substitution subtypes: C G>A T, C G>G C, C G>T A, T A>A T, T A>C G, and T A>G C, was refined by including the sequence context 5ʹ and 3ʹ of each mutated base to obtain a 96 trinucleotide substitution count matrix.

Classification of substitutions may be further refined by including the sequence context of each mutated base, either 5′ or 3′ or both.

The new A3 copies could explore the sequence space that expands the family of substrates for the action of deaminases, typically by modifying the sequence context of the C- > U edition.

This result suggested that our method has the potential to contribute to reduction of the amplification bias that is caused by an intrinsic property of the sequence context in substrate DNA.

Mutation analysis by SSPPs should therefore involve the sequence context, in order to obtain more informative predictions.