Sentence examples for by the multiple alignment from inspiring English sources

As demonstrated by the multiple alignment of DsbA in Additional file 1: Figure S2, these proteins may only be found in prokaryotic, unicellular, plant, fungi, and invertebrate organisms.

This was confirmed by the multiple alignment of the amplicons of iap-50-deg and prs-2-deg assays (data not shown).

Phylogenetic analysis was further confirmed by the multiple alignment percentage identity of 76.06% among their residues by using ClustalW and T-Coffee along with rapid scanning and correction of multiple sequence alignments).

Multiple alignments, calculated by the multiple alignment program multiz [ 57] of seven yeast species (S. cerevisiae, S. paradoxus, S. mikatae, S. kudriavzeii, S. bayanus, S. castelli, S. kluyveri) were downloaded from the Genome Browser at UCSC, California [ 58].

Full-envelope protein sequences for each serotype were aligned by using the multiple alignment tool of MEGA5 (www.megasoftware.net).net

The PCR products were sequenced and aligned by using the multiple alignment algorithm in the MegAlign package (DNASTAR) and the MEGA program.

All sequences were aligned and homology was calculated by using the multiple alignment algorithm in the MegAlign package (Windows version 7.1.0; DNASTAR, Madison, Wis).

Mature and precursor sequences of miRNAs across animal species were aligned with Clustal X 2.0 [35] respectively by using the multiple alignment.

DBL5ε homology models were created by submitting the multiple alignment to the HHpred server [38].

We get a better idea on the cause of sequence conservation by browsing the multiple alignment.

The sequence logos for R2 and R3 MYB repeats were created by submitting the multiple alignment sequences to the WebLogo server (http://weblogo.berkeley.edu/logo.cgi) [ 73].