Sentence examples for by the consensus sequence from inspiring English sources

We see that conditioning out the common influence represented by the consensus sequence usually (but not always) reduces the number of significant statistics.

The most well characterized is the TATA-box, defined by the consensus sequence 'TATAWAWAR', where the upstream 'T' is often located around −30 relative to A +1 (or G +1) position of the initiator (Inr) sequence for the transcription start site or TSS (Smale and Baltimore, 1989).

This patch is characterized by the consensus sequence FxHxxQEhxA, which has been described as a unique feature of the NAIP-like subfamily among the STAND clade [19] and now points to a common involvement of this patch in NLRs acting in a Sensor 2-like manner.

In both P. tricornutum and T. pseudonana, two proteins similar to glycolate oxidases (GOX) or possibly glycolate dehydrogenases (GDH) were identified: one of the two proteins (22568) contains the peroxisomal targeting motif PTS1, which is common in many eukaryotes and characterized by the consensus sequence (S/C/A)(K/R/H)(L/M) located at the extreme carboxy-terminus [69].

In our case, the information provided by the consensus sequence is modelled directly as a path graph with vertices labelled with the consensus nucleotide code (see Fig. 2).

The TATA box is represented by the consensus sequence TATAAT that occurs at about 30 to 40 base pairs (bp) upstream of the transcription start site.

An NI3C C-cap mutant carrying five additional mutations in the interface to the preceding repeat, previously designed by using the consensus sequence as a guide, showed a rigid-body movement of the C-cap towards the internal repeat.

In the present study, three new fusion proteins were designed, cloned and expressed and assessed for function, by combining the consensus sequence of dragline spider silk with three different antimicrobial peptides.

Sequence polymorphisms were identified by comparing the consensus sequence of each isolate to the corresponding gene sequence of the M. tuberculosis H37Rv genome using BioEdit (v7.1.3) [ 41].

Methods, 1st paragraph Supplemental Table 1 could be improved by including the consensus sequence for each motif and the observed sequence in the promoter.

Mutations in the variable regions were identified by comparing the consensus sequence of each clone with the closest published germ line.