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Identification of airborne fungi by the array was cheap and accurate.
Fluorescence ratios were normalized so that the mean value of the signal intensities obtained by the array was 1.00.
The detection of T. rubrum in sample C28 by the array was a false positive, since all confirmation results (ITS cloning, KOH mount, and tinea pedis) were all negative and the patient was lost during follw-up (Table 2).
If the result of array hybridization was in accordance with that of either ITS or D1/D2 domain sequencing, the identification made by the array was considered to be correct.
The detection of C. albicans in sample C36 by the array was also a false positive, because the results of ITS cloning, KOH mount, and tinea pedis were all negative in this sample.
A list of all Entrez Gene identifiers (Entrez Gene IDs) interrogated by the array was ranked according to the moderated t statistic, and this list was then used to perform a pre-ranked GSEA analysis using the publicly available Molecular Signatures Database (MSigDB, version 3.0, http://www.broadinstitute.org/gsea/msigdb/).org/gsea/msigdb/
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Hybridized probes were captured by streptavidin phycoerythrin conjugates, and the array was scanned and genotypes identified.
The array was patterned by EBL, followed by etching.
The array was performed by using the protocol provided by the manufacturer (Ary005; R&D Systems).
A server mentioned the array was inspired by the banchan accompanying grilled meats in Korean barbecue restaurants.
Cluster analysis of the array was obtained by Partek® Genomics Suite TM.
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