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We experimentally confirmed the feasibility of our approach by annealing oligonucleotides designed by the algorithm described above, and observing the self-assembled structures by AFM imaging and agarose gel electrophoresis.
Priority is determined by the algorithm described above.
This issue is discussed and handled by the algorithm described in Section 4.3.
While highly accurate, it did not meet efficiency requirements, and therefore it was replaced by the algorithm described below.
After the code length estimation, we search for the minimal polynomials which are the factors of the generator polynomial by the algorithm described in section 4.2.
In our method, the number of detected ROIs can be varied according to the number of fingertips appeared in the input images (the number of ROIs is automatically found by the algorithm described in the previous section).
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If the organism morphologically appeared to be one of the other aerobic actinomycetes, and had not been identified by the restriction enzymes as described above, the hsp65 amplicon was digested with MspI and HinfI, and the identity of the organism determined by using the algorithm described by Steingrube et al [16].
Identification of Aggregation-Prone and Non-Aggregation-Prone Proteins in Each Structural Class We identified aggregation prone stretches in the proteins of the S group by using the TANGO algorithm (Fernandez-Escamilla et al., 2004 ) and aggregation prone stretches in the proteins of the U group by using the algorithm described by Michelitsch and Weissman (Michelitsch and Weissman, 2000 ).
Cases in which an inversion is incomplete, i.e. one sequence spans only the inversion breakpoint, are not handled by that algorithm, but this can be accomplished by generalizing the algorithm described above.
The elements of the adjoint matrix as given in the RHS of (15) can be found by running the algorithm described previously.
Then, the identification of RS was done by using the algorithm described in [ 49].
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