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The methods were investigated under three missing data mechanisms, and 200 data sets were generated by stochastic simulation for each scenario.
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Variability between farms and animals is represented by stochastic simulation from probability distributions for herd size (negative binomial), faeces amount (gamma) and cfu/g of faeces (weibull).
We determined pc * by stochastic simulation of clusters until quarantine of the final infected (see Supporting Information for all details).
These estimates are also computed by stochastic simulation of the master Eq. (6), using the exact stochastic simulation algorithm of Gillespie [ 10] (see Methods for details regarding the method of simulation); this provides a direct test of the theory.
The results presented here were obtained by stochastic simulation of a selected population under several scenarios.
The experimental findings in [2] were supported by stochastic simulations of the chemotaxis signaling pathway using StochSim [16].
This allowed us to investigate, by stochastic simulation, the neuroprotective potential for a number of hypothetical interventions in the system.
An extensive survey of the parameters of the model is undertaken, where the distributions are computed by stochastic simulation.
We tested this hypothesis by stochastic simulation.
For positively selected alleles, the allele frequency trajectories can either be generated by stochastic simulation or be approximated using deterministic equations.
Evaluation of the performance of this GS strategy by stochastic simulation.
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