The presence of GST_N domain in individual protein was further confirmed by SMART analysis.
Search for the conserved domains by Simple Modular Architecture Research Tool (SMART) analysis and in NCBI databases revealed the presence of only RNaseIII and dsRB domains in these proteins, while in most other OsDCLs, DExD, Helicase-C, Duf283, PAZ, RNaseIII and dsRB domains, characteristic of plant DCL proteins, were present.
Of two proteins (637313946 from Thermosynechococcus elongatus BP-1, and 638107265 from Trichodesmium erythraeum ISM 101), CASc domain (caspase catalytic subunit P20) recognized by CDD was not identified in SMART analysis [ 23], and both of the proteins were excluded.
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SMART analysis revealed two trihelix domains in both the GmGT-2A and GmGT-2B proteins (Fig. 1A, C).
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b) Record of esophageal motility by Smart graph analysis software lab motility system Sandhill 8 - channels esophageal manometry.
The JmjC domains in most eubacterial JmjC proteins have low support from the SMART analysis and they are annotated as Cupin domain by Pfam with high e-value.
Subsequently, the NBS-LRR genes were determined by using the combination results of Pfam and SMART analysis.
