Sentence examples for by simulating sequences of from inspiring English sources
Every driver drives on pre-designated routes by simulating sequences of different behaviors: normal, aggressive and drowsy driving.
Here, we assess the performance of these six well-established tests and explore what characteristics specific to human mtDNA sequence may affect their efficacy by simulating sequence under various parameters with levels of recombination that vary around an empirically derived estimate for human mtDNA (population parameter ρ = 5.492).
We investigated both the bias and precision by simulating sequence evolution (Methods: Simulation of sequence evolution); for these simulations, we used relatively short ancestral sequences (compared to the primate genomes) for which smaller values of k will be enough to overcome k-mer homoplasy.
We generated artificial alignments by simulating sequence evolution along the tree of the original sequences using the parameters of the null models (in the absence of positive selection) for all genes.
We test Hapler by simulating sequencing, alignment, haplotype assembly and consensus reconstruction for population-sourced data representing diversities of 1.2%and4.4%4%.
Using mathematical calculations, models of sequence evolution, and simulated sequencing of published genomes, we address both evolutionary and sampling issues caused by direct reconstruction, including homoplasy, sequencing errors, and incomplete sequencing coverage.
By manipulating the user-defined mutation rate and population size, we were able to simulate sequences under known values of θ.
We confirmed this by simulating deep sequencing of the gut microbiota.
We performed inference on the SFS calculated from simulated sequences generated by FTEC.
By performing demographic inference on the SFS generated from simulated sequences, we then explore how many samples are needed for recovering parameters of a recent generalized growth epoch.
Two substitution models were employed for inferences of ancestral states among simulated sequences.
