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To correct for multiple testing p-values were adjusted using the method of Benjamini and Hochberg by setting the false discovery rate to 10% [ 30].
Statistical significance for TRE overrepresentation was set as p < 0.05 with additional filtering performed by setting the false discovery rate (FDR) at the level described (see Results section).
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The average received SNR is set as -7 dB and the local threshold is obtained by setting the local false alarm probability as 0.1.
And choose γ by setting the probability of false alarm P FA equal to α, as {P}_{FA}=underset{left{{boldsymbol{t}}_M Lleft {boldsymbol{t}}_Mright)>gamma right}}{int }pleft {boldsymbol{t}}_M;{widehat{mu}}_1,{mathcal{mathscr{H}}}_0right d{boldsymbol{t}}_M=alpha.
Next all CheckBoxes have to be disabled (by setting the Enabled property to false) before changing the Checked property of the other CheckBoxes.
We can do this by setting the coin's visibility to false.
Since the minor tick marks have no meaning for this axis (as the scaling is neither linear or logarithmic), we turn them off by setting the minortick.visible attribute to False.
Differentially expressed genes were identified by setting the significance level to a false discovery rate of <0.1.
Table 2 presents the false positive rates and false negative rates by setting the Bg-IBD level to be 100, 200, 300, 400 meioses apart.
We do this by setting the bullet's visibility property to False.
If a data filter has been applied to the data set in question, e.g. ignore or notice, the length of either the filtered or unfiltered x-grid may be returned by setting the 'filter' argument to True or False.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com