Sentence examples for by sequence assembly and from inspiring English sources

Finally, the full-length cDNA of a LpGPAT gene was obtained by sequence assembly and reamplification.

Therefore, we believe that the differences in Ks values were likely not caused by sequence assembly errors in medaka, stickleback and Tetraodon although all these genomes were sequenced using whole genome shotgun sequencing.

This non-redundant cDNA clone set contains 23040 bovine clones grouped by sequence assembly of ESTs into 14989 unique cDNA clusters and singletons.

Outbound primers were designed from the coding regions of each mt minichromosome to verify the size and the circular organization of the minichromosomes revealed above by sequence assembly (Table S1).

All the isotigs and singletons were identified by the analysis of sequence assembly and the assembled transcript sequences were functionally annotated using blastx algorithm and non-redundant protein database at NCBI by blast software with a cut-off e-value of 1.0E-3.

All these overlaps were further confirmed by sequence assembly.

lactis, were generated by 454 paired-end sequencing (Roche Life Sciences) followed by sequence assembly using Newbler 2.6 (Roche).

By examining the sequence assembly and annotation methodologies used for the Atlantic cod genome, we deduced the primary cause of the absence of the AFGP gene family from the annotated genome was the removal of all repetitive Roche 454 short reads before sequence assembly, which would exclude most of the highly repetitive AFGP coding sequences.

The 43 760 predicted protein-coding loci should be examined by further improvement of sequence assembly and gene prediction.

This can then be followed by the use of sequence assembly and gene prediction tools and parameters specifically developed for metagenomic sequences which will further help in improving assembly and gene prediction efficiency, respectively, and will result in a greater number of complete predicted proteins.

Our study has overcome these barriers by conducting de novo transcriptomic sequence assembly and inferring genomic location based on synteny with the related silk moth, B. mori.